| Date | Location | Result | |
| Nov 11, 2006 | Emporia, Kan. | Missouri Southern 34, Emporia State 33 | Box score |
| Nov 04, 2006 | Joplin, MO | Washburn 14, Missouri Southern 13 | Box score |
| Oct 28, 2006 | Hays, Kan. | Fort Hays State 10, Missouri Southern 0 | Box score |
| Oct 21, 2006 | Joplin, MO | Missouri Southern 31, Central Missouri 26 | Box score |
| Oct 14, 2006 | Joplin, MO | Missouri Western 24, Missouri Southern 17 | Box score |
| Oct 07, 2006 | Kirksville, Mo. | Truman 35, Missouri Southern 28 | Box score |
| Sep 30, 2006 | Joplin, MO | Northwest Missouri 24, Missouri Southern 7 | Box score |
| Sep 23, 2006 | Pittsburg, Kan. | Pittsburg State 48, Missouri Southern 24 | Box score |
| Sep 16, 2006 | Joplin, MO | Missouri Southern 42, Southwest Baptist 21 | Box score |
| Sep 09, 2006 | Searcy, Ark. | Missouri Southern 30, Harding 27 | Box score |
| Sep, 2, 2006 | Joplin, Mo. | Missouri Southern 28, Ouachita Baptist 22 | Box score |